Quantitative structure-kinetics modelling and design (QSKR)

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- Discover and exploit the kinetic hot spots of your target

Benefits

Optimization of interaction kinetics is a non-trivial task, much less explored than traditional affinity optimizations. Through the Sprint™ platform we can provide a comprehensive understanding of structure-kinetics relationships. This will give you an advantage in the optimization of leads into a new drug.

Deliverables

  • A quantitative model for interaction kinetics
  • A structural interpretation of structure-kinetics relationships
  • Identification of kinetic hot spots
  • Conceptual platform for structure-kinetics optimizations

Technical Details

The proprietary strategy developed by Beactica for calculating quantitative structure-kinetics relationships (QSKR) and to make a structural interpretation of the results is based on a combination of several techniques, as illustrated in the figure. In the first part of the scheme, selected ligand-based descriptors important for describing the kinetics are calculated. By combining the ligand-based descriptors with interaction-based descriptors, multivariate modelling can provide a quantitative model for the kinetics. This model also provides the basis for a structural interpretation and the identification of kinetic hot spots within the protein. A pharmacophore approach works as an alternative, fully ligand-based method.

 The Sprint™ workflow used at Beactica to model quantitative structure-kinetics relationships.

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